I had some trouble setting up the yyc even though I went through the pain of collecting all legacy Visual Studio versions... Once I arrived in GameMaker Preferences, set all paths, I clicked "Check". Damn, everything OK.
As I tried compiling the whole thing, GM gave me the error "Could not find file". I suspect this happens because I tried to compile a project made in GMS Standard Edition, so in the end I got it fixed by doing the following:
I still have no idea why this is, but it works and I'm happy. To whoever is seeing this: I feel your pain. It must have been a long way to find this page...